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This repository was archived by the owner on Mar 26, 2026. It is now read-only.
This repository was archived by the owner on Mar 26, 2026. It is now read-only.

Snapshot images are largely different to images from LAS #49

@PereraUmesha

Description

@PereraUmesha

Hello,

I am using readlif on .lif files from Confocal laser scanning fluorescence microscope (Leica Microsystems SP5).

Although I am getting most of the images as same as from LAS, only snapshot images are greatly different to the images from LAS.

Below, I listed the images from attached .lif file on LAS and from readlif.
(Please ignore the colors, as I have made the readlif images in gray-scale.)

Please help me to figure out the reason for this difference and how to get the images similar to LAS from readlif as well.

Thank you!

In LAS:
SP5_snpshot_1_LAS

from readlif
SP5_snpshot_1_Series010Snapshot All2_t0_c0_z0
SP5_snpshot_1_Series010Snapshot All2_t0_c1_z0
SP5_snpshot_1_Series010Snapshot All2_t0_c2_z0

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