hmmufotu-sum input arguments of assignment files

[sskimb]

Hi,
I am a big fan of hmmufotu.
In hmmufotu-sum, a list of assignment files should be provided as the second and on command line arguments.
When many samples are processed, this is cumbersome.

In fact, the "-l" option accepts a list file of sample and assignment duos.
I do not understand why the input arguments are still required.

Sincerely,

Sangsoo