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"""Singular-value-decomposition correctness tests."""
from __future__ import annotations
import numpy as np
import pytest
from .helpers import assert_allclose_float64, assert_orthogonal
pytestmark = [pytest.mark.fortran_end_to_end, pytest.mark.real_library]
def test_dgejsv_reconstructs_matrix_with_jacobi_svd(prik_lapack, scipy_lapack, f2py_lapack):
matrix = np.array([[3.0, 1.0], [0.0, 2.0]], dtype=np.float64, order="F")
expected_values = np.linalg.svd(matrix, compute_uv=False)
prik_a, f2py_a = matrix.copy(order="F"), matrix.copy(order="F")
prik_s, f2py_s = np.empty(2), np.empty(2)
prik_u, f2py_u = np.empty((2, 2), order="F"), np.empty((2, 2), order="F")
prik_v, f2py_v = np.empty((2, 2), order="F"), np.empty((2, 2), order="F")
prik_scalars = prik_lapack.dgejsv(
"A",
"U",
"V",
"N",
"N",
"N",
np.int32(2),
np.int32(2),
prik_a,
np.int32(2),
prik_s,
prik_u,
np.int32(2),
prik_v,
np.int32(2),
np.empty(128),
np.int32(128),
np.empty(16, dtype=np.int32),
np.int32(0),
)
f2py_result = f2py_lapack.dgejsv(
b"A",
b"U",
b"V",
b"N",
b"N",
b"N",
2,
f2py_a,
f2py_s,
f2py_u,
f2py_v,
np.empty(128),
np.empty(16, dtype=np.int32),
0,
)
scipy_s, scipy_u, scipy_v, _work, _iwork, scipy_info = scipy_lapack.dgejsv(
matrix.copy(order="F"), joba=4, jobu=0, jobv=0, jobr=1, jobt=0, jobp=1, lwork=128
)
assert f2py_result is None
assert prik_scalars[-1] == scipy_info == 0
for values, u, v in ((prik_s, prik_u, prik_v), (f2py_s, f2py_u, f2py_v), (scipy_s, scipy_u, scipy_v)):
assert_allclose_float64(values, expected_values, operation_size=2)
assert_orthogonal(u)
assert_orthogonal(v)
assert_allclose_float64(u @ np.diag(values) @ v.T, matrix, operation_size=2)
def test_dgesdd_reconstructs_matrix_with_divide_and_conquer_svd(prik_lapack, scipy_lapack, f2py_lapack):
matrix = np.array([[1.0, 2.0], [3.0, 4.0], [5.0, 7.0]], dtype=np.float64)
prik_a, f2py_a = matrix.copy(order="F"), matrix.copy(order="F")
prik_s, f2py_s = np.empty(2), np.empty(2)
prik_u, f2py_u = np.empty((3, 3), order="F"), np.empty((3, 3), order="F")
prik_vt, f2py_vt = np.empty((2, 2), order="F"), np.empty((2, 2), order="F")
prik_scalars = prik_lapack.dgesdd(
"A",
np.int32(3),
np.int32(2),
prik_a,
np.int32(3),
prik_s,
prik_u,
np.int32(3),
prik_vt,
np.int32(2),
np.empty(128),
np.int32(128),
np.empty(16, dtype=np.int32),
np.int32(0),
)
f2py_result = f2py_lapack.dgesdd(
b"A", 3, 2, f2py_a, f2py_s, f2py_u, f2py_vt, np.empty(128), 128, np.empty(16, dtype=np.int32), 0
)
scipy_u, scipy_s, scipy_vt, scipy_info = scipy_lapack.dgesdd(
matrix.copy(order="F"), compute_uv=1, full_matrices=1, lwork=128
)
assert f2py_result is None
assert prik_scalars[-1] == scipy_info == 0
for u, values, vt in ((prik_u, prik_s, prik_vt), (f2py_u, f2py_s, f2py_vt), (scipy_u, scipy_s, scipy_vt)):
assert_orthogonal(u)
assert_orthogonal(vt.T)
assert_allclose_float64(u[:, :2] @ np.diag(values) @ vt, matrix, operation_size=3)
assert_allclose_float64(prik_s, scipy_s, operation_size=3)
assert_allclose_float64(f2py_s, scipy_s, operation_size=3)
def test_dgesvd_reconstructs_matrix(prik_lapack, scipy_lapack, f2py_lapack):
matrix = np.array([[1.0, 2.0], [3.0, 4.0], [5.0, 7.0]], dtype=np.float64)
prik_a, f2py_a = matrix.copy(order="F"), matrix.copy(order="F")
prik_s, f2py_s = np.empty(2, dtype=np.float64), np.empty(2, dtype=np.float64)
prik_u, f2py_u = np.zeros((3, 3), dtype=np.float64, order="F"), np.zeros((3, 3), dtype=np.float64, order="F")
prik_vt, f2py_vt = np.zeros((2, 2), dtype=np.float64, order="F"), np.zeros((2, 2), dtype=np.float64, order="F")
prik_scalars = prik_lapack.dgesvd(
"A",
"A",
np.int32(3),
np.int32(2),
prik_a,
np.int32(3),
prik_s,
prik_u,
np.int32(3),
prik_vt,
np.int32(2),
np.empty(32),
np.int32(32),
np.int32(0),
)
f2py_result = f2py_lapack.dgesvd(b"A", b"A", 3, 2, f2py_a, f2py_s, f2py_u, f2py_vt, np.empty(32), 32, 0)
scipy_u, scipy_s, scipy_vt, scipy_info = scipy_lapack.dgesvd(
matrix.copy(order="F"), compute_uv=1, full_matrices=1, lwork=32
)
assert prik_scalars == (3, 2, 3, 3, 2, 32, 0)
assert f2py_result is None
assert scipy_info == 0
for u, values, vt in (
(prik_u, prik_s, prik_vt),
(f2py_u, f2py_s, f2py_vt),
(scipy_u, scipy_s, scipy_vt),
):
assert np.all(np.diff(values) <= 0.0)
assert_orthogonal(u)
assert_orthogonal(vt.T)
assert_allclose_float64(u[:, :2] @ np.diag(values) @ vt, matrix, operation_size=3)
assert_allclose_float64(prik_s, scipy_s, operation_size=3)
assert_allclose_float64(f2py_s, scipy_s, operation_size=3)
def test_dorcsd_decomposes_partitioned_orthogonal_matrix(prik_lapack, scipy_lapack, f2py_lapack):
angle = 0.4
cosine_value = np.cos(angle)
sine_value = np.sin(angle)
x11 = np.array([[cosine_value]], dtype=np.float64, order="F")
x12 = np.array([[-sine_value]], dtype=np.float64, order="F")
x21 = np.array([[sine_value]], dtype=np.float64, order="F")
x22 = np.array([[cosine_value]], dtype=np.float64, order="F")
prik_blocks = [block.copy(order="F") for block in (x11, x12, x21, x22)]
f2py_blocks = [block.copy(order="F") for block in (x11, x12, x21, x22)]
prik_theta, f2py_theta = np.empty(1), np.empty(1)
prik_u1, prik_u2, prik_v1t, prik_v2t = (np.empty((1, 1), order="F") for _ in range(4))
f2py_u1, f2py_u2, f2py_v1t, f2py_v2t = (np.empty((1, 1), order="F") for _ in range(4))
prik_scalars = prik_lapack.dorcsd(
"Y",
"Y",
"Y",
"Y",
"N",
"O",
np.int32(2),
np.int32(1),
np.int32(1),
prik_blocks[0],
np.int32(1),
prik_blocks[1],
np.int32(1),
prik_blocks[2],
np.int32(1),
prik_blocks[3],
np.int32(1),
prik_theta,
prik_u1,
np.int32(1),
prik_u2,
np.int32(1),
prik_v1t,
np.int32(1),
prik_v2t,
np.int32(1),
np.empty(128),
np.int32(128),
np.empty(16, dtype=np.int32),
np.int32(0),
)
f2py_result = f2py_lapack.dorcsd(
b"Y",
b"Y",
b"Y",
b"Y",
b"N",
b"O",
2,
1,
1,
f2py_blocks[0],
f2py_blocks[1],
f2py_blocks[2],
f2py_blocks[3],
f2py_theta,
f2py_u1,
f2py_u2,
f2py_v1t,
f2py_v2t,
np.empty(128),
128,
np.empty(16, dtype=np.int32),
0,
)
_c11, _c12, _c21, _c22, scipy_theta, scipy_u1, scipy_u2, scipy_v1t, scipy_v2t, scipy_info = scipy_lapack.dorcsd(
x11, x12, x21, x22, compute_u1=1, compute_u2=1, compute_v1t=1, compute_v2t=1, trans=0, signs=0, lwork=128
)
assert f2py_result is None
assert prik_scalars[-1] == scipy_info == 0
for theta, u1, u2, v1t, v2t in (
(prik_theta, prik_u1, prik_u2, prik_v1t, prik_v2t),
(f2py_theta, f2py_u1, f2py_u2, f2py_v1t, f2py_v2t),
(scipy_theta, scipy_u1, scipy_u2, scipy_v1t, scipy_v2t),
):
cosine = np.array([[np.cos(theta[0])]])
sine = np.array([[np.sin(theta[0])]])
assert_allclose_float64(theta, [angle])
for factor in (u1, u2, v1t, v2t):
assert_allclose_float64(factor.T @ factor, np.eye(1))
assert_allclose_float64(np.abs(u1 @ cosine @ v1t), np.abs(x11))
assert_allclose_float64(np.abs(u1 @ sine @ v2t), np.abs(x12))
assert_allclose_float64(np.abs(u2 @ sine @ v1t), np.abs(x21))
assert_allclose_float64(np.abs(u2 @ cosine @ v2t), np.abs(x22))
def test_dlasd4_solves_rank_one_secular_equation(prik_lapack, scipy_lapack, f2py_lapack):
diagonal = np.array([1.0, 3.0], dtype=np.float64)
update = np.array([0.6, 0.8], dtype=np.float64)
rho = 1.0
expected = float(np.sqrt(np.linalg.eigvalsh(np.diag(diagonal * diagonal) + rho * np.outer(update, update))[0]))
prik_delta, f2py_delta = np.empty(2), np.empty(2)
prik_work, f2py_work = np.empty(2), np.empty(2)
prik_scalars = prik_lapack.dlasd4(
np.int32(2), np.int32(1), diagonal, update, prik_delta, np.float64(rho), np.float64(0.0), prik_work, np.int32(0)
)
f2py_result = f2py_lapack.dlasd4(2, 1, diagonal, update, f2py_delta, rho, 0.0, f2py_work, 0)
scipy_delta, scipy_sigma, scipy_work, scipy_info = scipy_lapack.dlasd4(0, diagonal, update, rho=rho)
assert f2py_result is None
assert prik_scalars[-1] == scipy_info == 0
prik_sigma = prik_scalars[-2]
assert_allclose_float64(prik_sigma, expected, operation_size=2)
assert_allclose_float64(scipy_sigma, expected, operation_size=2)
assert_allclose_float64(prik_delta, diagonal - prik_sigma)
assert_allclose_float64(prik_work, diagonal + prik_sigma)
assert_allclose_float64(f2py_delta, scipy_delta)
assert_allclose_float64(f2py_work, scipy_work)
secular = 1.0 + rho * np.sum(update * update / (diagonal * diagonal - prik_sigma * prik_sigma))
assert_allclose_float64(secular, 0.0, operation_size=2)