In addition sub/obj_closure, it would be useful to have
sub/obj_equivalents - all members of equivalence clique (reflexive: includes self)
sub/obj_xrefs- all xrefs annotations for all members of clique (reflexive: includes self.curie)
These would be useful for query purposes. Currently in biolink we take the input ID and use subject_closure, which includes equivalence, but also allows parents which we don't want.
xrefs are useful for near-equivalence. E.g. when querying for gene-disease, we want to allow input of uniprot protein xref
In addition sub/obj_closure, it would be useful to have
sub/obj_equivalents- all members of equivalence clique (reflexive: includes self)sub/obj_xrefs- all xrefs annotations for all members of clique (reflexive: includes self.curie)These would be useful for query purposes. Currently in biolink we take the input ID and use subject_closure, which includes equivalence, but also allows parents which we don't want.
xrefs are useful for near-equivalence. E.g. when querying for gene-disease, we want to allow input of uniprot protein xref