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add binarize function seed

Status: Open.

#631 In aertslab/pySCENIC;

· Liripo opened on Nov 20, 2025

[BUG] <code>src/resources/</code> contents already provided by <code>ctxcore</code>

bugSomething isn't workingSomething isn't working

Status: Open.

#630 In aertslab/pySCENIC;

· dlaehnemann opened on Nov 14, 2025

Low regulon recovery in pySCENIC ctx for two butterfly scRNA-seq datasets

bugSomething isn't workingSomething isn't working

Status: Open.

#628 In aertslab/pySCENIC;

· francicco opened on Oct 27, 2025

Warning message - unsure if process is running or not?

Status: Open.

#627 In aertslab/pySCENIC;

· benjytan88 opened on Aug 16, 2025

[BUG]Running grn but discontinued without any errors

bugSomething isn't workingSomething isn't working

Status: Open.

#626 In aertslab/pySCENIC;

· LynnChan99 opened on Aug 12, 2025

Low expression and high RSS of regulons

questionFurther information is requestedFurther information is requested

Status: Open.

#624 In aertslab/pySCENIC;

· Li-ZhiD opened on Jul 24, 2025

Significant variation in GRNBoost2 results with minor cell subsampling (removing one cell) in pySCENIC

Status: Open.

#623 In aertslab/pySCENIC;

· jklupup opened on Jul 15, 2025

Attribute errors caused by dependency conflicts in "binarize()"

Status: Open.

#622 In aertslab/pySCENIC;

· zhangzihao01 opened on Jun 24, 2025

[BUG] pyscenic ctx error

bugSomething isn't workingSomething isn't working

Status: Open.

#621 In aertslab/pySCENIC;

· Sophielsn opened on Jun 23, 2025

Manually Adding ChIP-Seq Data

Status: Open.

#619 In aertslab/pySCENIC;

· rayajallad opened on May 28, 2025

[results] After df2regulons(), gene name formatting in each regulon is weird

questionFurther information is requestedFurther information is requested

Status: Open.

#618 In aertslab/pySCENIC;

· redbybeing opened on May 28, 2025

Issue with the "Intersection of gene_names and tf_names is empty" while running the grnboost2 step of pySCENIC in hpc

Status: Open.

#616 In aertslab/pySCENIC;

· npees1 opened on May 24, 2025