Issues

rebase devel_detectRuns2.0 branch and fix pending issues
Feature
bioinformatics-ptp/detectRUNS#49 · opened on Jun 10, 2026
Combine chromosomes with plot stacked runs
bioinformatics-ptp/detectRUNS#47 · opened on Aug 29, 2024
1
Why the result of Froh_genome be the same as the result of Froh_Class_0 for each individual?
bioinformatics-ptp/detectRUNS#44 · opened on Apr 4, 2024
3
plot_Runs() returns nothing. And empty file when asked to save the plot
bioinformatics-ptp/detectRUNS#38 · opened on Apr 25, 2023
7
plotRuns produces an unreadble file.pdf
bioinformatics-ptp/detectRUNS#37 · opened on Nov 29, 2022
2
Running detectRUNS in draft assemblies
bioinformatics-ptp/detectRUNS#34 · opened on May 2, 2022
1
snpInsideRunsCpp(runsChrom, mapKrom, genotypeFile) : Not compatible with requested type: [type=character; target=integer]
bioinformatics-ptp/detectRUNS#33 · opened on Apr 21, 2022
5
🔧 manage packages in project using renv
bioinformatics-ptp/detectRUNS#30 · opened on Mar 28, 2022
plot_SnpsInRuns and plot_manhattanRuns plotting all SNPs as 100%
bioinformatics-ptp/detectRUNS#25 · opened on Mar 16, 2021
10
Allow extra chromosomes in map files
bioinformatics-ptp/detectRUNS#24 · opened on Mar 8, 2021
Error in names(x) <- value : 'names' attribute [2] must be the same length as the vector [1]
bioinformatics-ptp/detectRUNS#23 · opened on Mar 8, 2021
2
Customizing plots
bioinformatics-ptp/detectRUNS#22 · opened on Feb 26, 2021
2
return mean values and standard error/deviation
bioinformatics-ptp/detectRUNS#16 · opened on Jun 2, 2020
2
Function readPOPCpp() doesn't work with tab-separated input ped file
bioinformatics-ptp/detectRUNS#15 · opened on May 25, 2020
3
Lower package size as described when checking package
bioinformatics-ptp/detectRUNS#14 · opened on Oct 21, 2019
Deal with tab-separated ped files
bioinformatics-ptp/detectRUNS#10 · opened on Oct 21, 2019
1