VCF-RDFizer/pyproject.toml at main · ecrum19/VCF-RDFizer · GitHub

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[build-system]
requires = ["setuptools>=77", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "vcf-rdfizer"
version = "3.0.2"
description = "Docker-first VCF to RDF conversion targeting the VCF Core vocabulary, with compressed queryable representations (HDT, COTTAS), semantic validation, and data linking"
readme = "README.md"
requires-python = ">=3.10"
license = "MIT"
license-files = ["LICENSE"]
authors = [
  { name = "VCF-RDFizer maintainers" }
]
keywords = ["bioinformatics", "vcf", "rdf", "rml", "docker", "hdt"]
classifiers = [
  "Development Status :: 4 - Beta",
  "Environment :: Console",
  "Intended Audience :: Science/Research",
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3.10",
  "Programming Language :: Python :: 3.11",
  "Programming Language :: Python :: 3.12",
  "Topic :: Scientific/Engineering :: Bio-Informatics",
]
dependencies = [
  "rich>=13.7.0",
  "rdflib>=7.0.0",
]

[project.urls]
Homepage = "https://github.com/ecrum19/VCF-RDFizer"
Issues = "https://github.com/ecrum19/VCF-RDFizer/issues"

[project.scripts]
vcf-rdfizer = "vcf_rdfizer:main"
vcf-rdfizer-rules = "vcf_rdfizer_rules:main"
vcf-rdfizer-link = "vcf_rdfizer_link:main"

[project.optional-dependencies]
dev = [
  "build>=1.2.2",
  "twine>=5.1.1",
]

[tool.setuptools]
py-modules = ["vcf_rdfizer", "vcf_rdfizer_gzip", "vcf_rdfizer_rules", "vcf_rdfizer_link", "vcf_rdfizer_vocab"]
packages = ["vcf_rdfizer_data", "vcf_rdfizer_data.rules", "vcf_rdfizer_data.linkers", "vcf_rdfizer_linking"]
include-package-data = true

[tool.setuptools.package-data]
"vcf_rdfizer_data.rules" = ["default_rules.ttl"]
"vcf_rdfizer_data.linkers" = ["*/linker.ttl", "*/resolver.py", "*/genes.gff3", "*/README.md"]