From 67aff72a6db0936ec507cce0cd1c2e49f3142973 Mon Sep 17 00:00:00 2001
From: Marouen <marouenbg@users.noreply.github.com>
Date: Fri, 31 Jul 2026 19:57:18 -0400
Subject: [PATCH] Update MLE description in cobra.py

Clarified the default setting for MLE in the documentation.
---
 netZooPy/cobra/cobra.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/netZooPy/cobra/cobra.py b/netZooPy/cobra/cobra.py
index 02c62393..2f84f76c 100644
--- a/netZooPy/cobra/cobra.py
+++ b/netZooPy/cobra/cobra.py
@@ -22,7 +22,7 @@ def cobra(X, expression, cobra='nnls', alpha: np.float64=0.1, mode='corr'):
                 regression mode
                 nnls: Non-negative least square (default)
                 nnlasso: Non-negative LASSO
-                MLE: Maximum likelihood estimation
+                MLE: Maximum likelihood estimation (default in R)
             alpha : np.float64
                 Regularization parameter for the LASSO model. Default is 0.1 and it can be tuned using cross-validation.
                 Only used when cobra='nnlasso'.