webKinPred/docker-compose.yml at master · openKinetics/webKinPred · GitHub

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services:
  redis:
    image: redis:7-alpine
    restart: unless-stopped
    healthcheck:
      test: ["CMD", "redis-cli", "ping"]
      interval: 10s
      timeout: 5s
      retries: 5

  backend:
    build:
      context: .
      dockerfile: Dockerfile.web
    image: webkinpred-web:latest
    ports:
      - "8000:8000"
    volumes:
      - ./media:/app/media
      - ./db.sqlite3:/app/db.sqlite3
      - ./manage.py:/app/manage.py
      - ./api:/app/api
      - ./models:/app/models:ro
      - ./db_models:/app/db_models
      - ./webKinPred:/app/webKinPred
      - ./fastas:/app/fastas
      - ./tools:/app/tools
      - ./staticfiles:/app/staticfiles
    environment:
      - PYTHONPATH=/app
      - DEBUG=1
      - DJANGO_SETTINGS_MODULE=webKinPred.settings_docker
      - DJANGO_SECRET_KEY=${DJANGO_SECRET_KEY:?DJANGO_SECRET_KEY must be set}
      - REDIS_URL=redis://redis:6379/0
      - MMSEQS_TMP_DIR=/app/mmseqs_tmp
      - GPU_EMBED_SERVICE_URL=${GPU_EMBED_SERVICE_URL:-}
      - GPU_EMBED_SERVICE_TOKEN=${GPU_EMBED_SERVICE_TOKEN:-}
      - GPU_EMBED_HEALTH_TTL_SECONDS=${GPU_EMBED_HEALTH_TTL_SECONDS:-10}
      - GPU_EMBED_JOB_TIMEOUT_SECONDS=${GPU_EMBED_JOB_TIMEOUT_SECONDS:-1200}
      - GPU_EMBED_FAIL_CLOSED=${GPU_EMBED_FAIL_CLOSED:-0}

    command: gunicorn webKinPred.wsgi:application --bind 0.0.0.0:8000 --workers 2 --timeout 120
    depends_on:
      redis:
        condition: service_healthy
    healthcheck:
      test: ["CMD", "curl", "-f", "http://localhost:8000/api/health/"]
      interval: 30s
      timeout: 10s
      retries: 3
      start_period: 40s

  frontend:
    build:
      context: ./frontend
      dockerfile: Dockerfile
    ports:
      - "5173:5173"
    volumes:
      - ./frontend:/app
      - frontend_node_modules:/app/node_modules
    environment:
      - VITE_API_BASE_URL=http://localhost:8000/api
      - NODE_ENV=development
      - DOCKER=true
    depends_on:
      backend:
        condition: service_healthy
    healthcheck:
      test: ["CMD", "wget", "--no-verbose", "--tries=1", "--spider", "http://localhost:5173"]
      interval: 30s
      timeout: 10s
      retries: 3
      start_period: 60s

  celery:
    build:
      context: .
      dockerfile: Dockerfile
      args:
        WEBKINPRED_ENVS_IMAGE: ${WEBKINPRED_ENVS_IMAGE:-webkinpred-envs:latest}
    image: webkinpred-worker:latest
    volumes:
      - ./media:/app/media
      - ./db.sqlite3:/app/db.sqlite3
      - ./manage.py:/app/manage.py
      - ./api:/app/api
      - ./models:/app/models:ro
      - ./db_models:/app/db_models
      - ./webKinPred:/app/webKinPred
      - ./fastas:/app/fastas
      - ./tools:/app/tools
      - ./staticfiles:/app/staticfiles
    environment:
      - PYTHONPATH=/app
      - DEBUG=1
      - DJANGO_SETTINGS_MODULE=webKinPred.settings_docker
      - DJANGO_SECRET_KEY=${DJANGO_SECRET_KEY:?DJANGO_SECRET_KEY must be set}
      - REDIS_URL=redis://redis:6379/0
      - GPU_EMBED_SERVICE_URL=${GPU_EMBED_SERVICE_URL:-}
      - GPU_EMBED_SERVICE_TOKEN=${GPU_EMBED_SERVICE_TOKEN:-}
      - GPU_EMBED_HEALTH_TTL_SECONDS=${GPU_EMBED_HEALTH_TTL_SECONDS:-10}
      - GPU_EMBED_JOB_TIMEOUT_SECONDS=${GPU_EMBED_JOB_TIMEOUT_SECONDS:-1200}
      - GPU_EMBED_FAIL_CLOSED=${GPU_EMBED_FAIL_CLOSED:-0}
    depends_on:
      redis:
        condition: service_healthy
      backend:
        condition: service_healthy
    command: celery -A webKinPred worker --loglevel=info --queues=webkinpred --concurrency=1
    healthcheck:
      test: ["CMD", "celery", "-A", "webKinPred", "inspect", "ping"]
      interval: 30s
      timeout: 10s
      retries: 3
      start_period: 60s
    security_opt:
      - apparmor:unconfined

  celery-beat:
    image: webkinpred-web:latest
    volumes:
      - ./media:/app/media
      - ./db.sqlite3:/app/db.sqlite3
      - ./manage.py:/app/manage.py
      - ./api:/app/api
      - ./models:/app/models:ro
      - ./db_models:/app/db_models
      - ./webKinPred:/app/webKinPred
      - ./fastas:/app/fastas
      - ./tools:/app/tools
      - ./staticfiles:/app/staticfiles

    environment:
      - PYTHONPATH=/app
      - DEBUG=1
      - DJANGO_SETTINGS_MODULE=webKinPred.settings_docker
      - DJANGO_SECRET_KEY=${DJANGO_SECRET_KEY:?DJANGO_SECRET_KEY must be set}
      - REDIS_URL=redis://redis:6379/0
      - GPU_EMBED_SERVICE_URL=${GPU_EMBED_SERVICE_URL:-}
      - GPU_EMBED_SERVICE_TOKEN=${GPU_EMBED_SERVICE_TOKEN:-}
      - GPU_EMBED_HEALTH_TTL_SECONDS=${GPU_EMBED_HEALTH_TTL_SECONDS:-10}
      - GPU_EMBED_JOB_TIMEOUT_SECONDS=${GPU_EMBED_JOB_TIMEOUT_SECONDS:-1200}
      - GPU_EMBED_FAIL_CLOSED=${GPU_EMBED_FAIL_CLOSED:-0}
    depends_on:
      redis:
        condition: service_healthy
      backend:
        condition: service_healthy
    command: celery -A webKinPred beat --loglevel=info
    healthcheck:
      test: ["CMD", "pgrep", "-f", "celery.*beat"]
      interval: 30s
      timeout: 10s
      retries: 3
      start_period: 60s

volumes:
  frontend_node_modules: