iphop/setup.py at main · simroux/iphop · GitHub

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from setuptools import find_packages, setup

setup(
    name="iphop",
    version="1.4.2",
    packages=find_packages(),
    license="Modified BSD",
    description="Predict host genus from genomes of uncultivated phages.",
    long_description=open("README.md").read(),
    long_description_content_type="text/markdown",
    install_requires=[
        "biopython>=1.79",
        "scikit-learn>=0.22",
        "protobuf>=3.19",
        "click>=8.0.1",
        "pandas>=1.3.2",
        "joblib>=1.0.1",
        "tensorflow==2.7.0",
        "tensorflow-decision-forests==0.2.2"
    ],
    python_requires=">=3.6",
    entry_points={"console_scripts": ["iphop=iphop.iphop:cli"]},
    package_data={'iphop': [
        'utils/*',
        'utils/CRISPR/*',
        'utils/PHP_src/*',
        'utils/PHP_src/10k/*',
        'utils/PHP_src/1k/*',
        'utils/PHP_src/3k/*',
        'utils/PHP_src/5k/*',
        'utils/PHP_src/FullLength/*',
        'utils/RaFAH_src/*',
        'utils/VHM_src/*',
        'classifiers/*',
        'classifiers/*/*',
        'classifiers/*/*/*'
        ]},
    url="https://https://bitbucket.org/srouxjgi/iphop",
    keywords=["bioinformatics", "genomics", "metagenomics", "viromics"],
    author="Simon Roux",
    classifiers=[
        "Intended Audience :: Science/Research",
        "Natural Language :: English",
        "Topic :: Software Development :: Libraries",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "License :: OSI Approved :: BSD License",
        "Programming Language :: Python :: 3",
    ],
)