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Pull requests: BenLangmead/bowtie2

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Pull requests list

Fix for compressed FASTQ output names with spaces
#525 opened Jun 13, 2026 by jeffreybarrick Loading…
Enable RISC-V 64-bit
#517 opened Dec 1, 2025 by hrw Loading…
1
Adds optional arguments to report k-best alignments with a NH tag
#499 opened Dec 25, 2024 by milkschen Loading…
Documenting Docker offerings
#462 opened Jan 20, 2024 by jamesbraza Loading…
1
1
Added CONTRIBUTING.md explaining docs
#461 opened Jan 20, 2024 by jamesbraza Loading…
1
1
Merge levioSAM updates
#342 opened Jun 5, 2021 by BenLangmead Owner Loading…
Refactor to make the Travis log more readable.
#287 opened Apr 13, 2020 by junaruga Contributor Loading…
Dropped -std=c++98 and improved portability
#262 opened Aug 29, 2019 by KeironO Loading…
In order to support the arm platform
#259 opened Jul 23, 2019 by xusailor Loading…
2
fixes bowtie2-build TypeError in PyPy
#185 opened Mar 4, 2018 by nellore Loading…
3
Quote -x parameter in bowtie2 wrapper.
#143 opened Sep 20, 2017 by shapemapper Loading…
Thread scaling improvements
#123 opened Jul 18, 2017 by BenLangmead Owner Loading…
1
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