Skip to content

Build PETSc 3.24 #96

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
kwabenantim merged 3 commits into from
Apr 13, 2026
Merged

Build PETSc 3.24 #96

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
fd49d49
#95 Check for cmake
kwabenantim Apr 13, 2026
fdd5d47
#94 Add DYLD_LIBRARY_PATH
kwabenantim Apr 13, 2026
ad4276c
#95 Update github actions
kwabenantim Apr 13, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions .github/workflows/build-all.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -67,10 +67,10 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Checkout Chaste
uses: actions/checkout@v4
uses: actions/checkout@v6
with:
repository: Chaste/Chaste
path: Chaste
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-boost.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-hdf5.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-petsc.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-sundials.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-vtk.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-xercesc.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/build-xsd.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set env
run: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/docker-portability-custom.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -69,7 +69,7 @@ jobs:
XSD=${{ github.event.inputs.xsd_ver }}
steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set up QEMU
uses: docker/setup-qemu-action@v3
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/docker-portability-system.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v6

- name: Set up QEMU
uses: docker/setup-qemu-action@v3
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/portability-tests.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,7 @@ jobs:

steps:
- name: Checkout Chaste/${{ github.event.inputs.chaste_branch }}
uses: actions/checkout@v4
uses: actions/checkout@v6
with:
repository: Chaste/Chaste
ref: ${{ github.event.inputs.chaste_branch }}
Expand Down
1 change: 1 addition & 0 deletions scripts/custom/install_boost.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -134,6 +134,7 @@ setenv BOOST_DIR ${install_dir}

prepend-path LIBRARY_PATH ${install_dir}/lib
prepend-path LD_LIBRARY_PATH ${install_dir}/lib
prepend-path DYLD_LIBRARY_PATH ${install_dir}/lib
prepend-path LD_RUN_PATH ${install_dir}/lib

prepend-path INCLUDE ${install_dir}/include
Expand Down
1 change: 1 addition & 0 deletions scripts/custom/install_hdf5.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -149,6 +149,7 @@ prepend-path PATH ${install_dir}/bin

prepend-path LIBRARY_PATH ${install_dir}/lib
prepend-path LD_LIBRARY_PATH ${install_dir}/lib
prepend-path DYLD_LIBRARY_PATH ${install_dir}/lib
prepend-path LD_RUN_PATH ${install_dir}/lib

prepend-path INCLUDE ${install_dir}/include
Expand Down
1 change: 1 addition & 0 deletions scripts/custom/install_petsc.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -177,6 +177,7 @@ prepend-path PATH ${install_dir}/${arch}/bin

prepend-path LIBRARY_PATH ${install_dir}/${arch}/lib
prepend-path LD_LIBRARY_PATH ${install_dir}/${arch}/lib
prepend-path DYLD_LIBRARY_PATH ${install_dir}/lib
prepend-path LD_RUN_PATH ${install_dir}/${arch}/lib

prepend-path INCLUDE ${install_dir}/${arch}/include
Expand Down
4 changes: 4 additions & 0 deletions scripts/custom/install_sundials.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -54,6 +54,9 @@ if version_lt "${version}" '3.1'; then # Sundials < 3.1.x
exit 1
fi

# Check for cmake
cmake --version

# Download and extract source
mkdir -p ${base_dir}/src/sundials
cd ${base_dir}/src/sundials
Expand Down Expand Up @@ -108,6 +111,7 @@ setenv SUNDIALS_ROOT ${install_dir}

prepend-path LIBRARY_PATH ${install_dir}/lib
prepend-path LD_LIBRARY_PATH ${install_dir}/lib
prepend-path DYLD_LIBRARY_PATH ${install_dir}/lib
prepend-path LD_RUN_PATH ${install_dir}/lib

prepend-path INCLUDE ${install_dir}/include
Expand Down
4 changes: 4 additions & 0 deletions scripts/custom/install_vtk.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -54,6 +54,9 @@ if version_lt "${version}" '6.3'; then # VTK < 6.3.x
exit 1
fi

# Check for cmake
cmake --version

# Download and extract source
mkdir -p ${base_dir}/src/vtk
cd ${base_dir}/src/vtk
Expand Down Expand Up @@ -261,6 +264,7 @@ setenv VTK_ROOT ${install_dir}

prepend-path LIBRARY_PATH ${install_dir}/lib
prepend-path LD_LIBRARY_PATH ${install_dir}/lib
prepend-path DYLD_LIBRARY_PATH ${install_dir}/lib
prepend-path LD_RUN_PATH ${install_dir}/lib

prepend-path INCLUDE ${install_dir}/include/vtk-${major}.${minor}
Expand Down
1 change: 1 addition & 0 deletions scripts/custom/install_xercesc.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -115,6 +115,7 @@ setenv XERCESC_LIBRARY ${install_dir}/lib

prepend-path LIBRARY_PATH ${install_dir}/lib
prepend-path LD_LIBRARY_PATH ${install_dir}/lib
prepend-path DYLD_LIBRARY_PATH ${install_dir}/lib
prepend-path LD_RUN_PATH ${install_dir}/lib

prepend-path INCLUDE ${install_dir}/include
Expand Down
Loading