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Ensembl / nextflow_modules Public

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Disha/nf test ci#36

Merged

Dishalodha merged 24 commits into

mainEnsembl/nextflow_modules:mainfrom

disha/nf-test-CIEnsembl/nextflow_modules:disha/nf-test-CICopy head branch name to clipboard

Apr 10, 2026

Conversation Commits24 (24)Checks Files changed

Merged

Disha/nf test ci#36
Dishalodha merged 24 commits into
mainfrom
disha/nf-test-CI

Commits

Commits on Mar 18, 2026

basic nf-test yml file
Dishalodha
committed
update the nf-test.yaml to basic format
Dishalodha
committed
update nextflow version
Dishalodha
committed
added singularity
Dishalodha
committed
correct nf-test
Dishalodha
committed
correct nf-test
Dishalodha
committed
sync the yml file correctly after cherry-pick
Dishalodha
committed
add nf-core lint
Dishalodha
committed
correcting the id
Dishalodha
committed
trying to extract module names for lint
Dishalodha
committed
linting extracting the module nf-core style
Dishalodha
committed
actions update
Dishalodha
committed
sync the file after cherry-pick
Dishalodha
committed
prevent checking nf-test verison
Dishalodha
committed
update the url test
Dishalodha
committed

Commits on Mar 19, 2026

updating the env so it doesnt check the test
Dishalodha
committed
remove the stdout
Dishalodha
committed
update the test to match sterr
Dishalodha
committed
update the snapshot and test as it was capturing sterr which varied
Dishalodha
committed
remove the unwanted env variables
Dishalodha
committed

Commits on Apr 10, 2026

Apply suggestions from code review

Dishalodha
and
JAlvarezJarreta
authored
Update linting.yaml to remove unnecessary variables
Dishalodha
authored
Update python version in linting.yaml
Dishalodha
authored
Update python version in nf-test.yaml
Dishalodha
authored

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