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Pull requests: FNLCR-DMAP/SCSAWorkflow

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Pull requests list

Add PhenoGraph GPU refactor: new transform module, CPU/GPU templates,…
#429 opened Apr 21, 2026 by fangliu117 Collaborator Loading…
feat(histogram): add faceted plots with adaptive layout
#428 opened Apr 17, 2026 by zhan4329 Loading…
17
refactor(templates): use pio.to_image() for relational heatmap PNG ex…
#413 opened Nov 26, 2025 by georgezakinih Contributor Loading…
feat: refactor structure of galaxy_tool
#404 opened Oct 3, 2025 by fangliu117 Collaborator Loading…
18
feat(ripley_template): Add Ripley‑L template, helpers, fixtures and t…
#355 opened Jul 16, 2025 by fangliu117 Collaborator Loading…
@georgezakinih
6
feat(plot_qc_metrics): plot single cell quality control metrics
#354 opened Jul 15, 2025 by abombin Collaborator Loading…
@georgezakinih @abombin
7
Merged dim spatial
#350 opened Jun 4, 2025 by ying39purdue Contributor Loading…
10
feat(downsample):AnnData input and output for downsample_cells
#349 opened May 29, 2025 by Chloe-Thangavelu Contributor Loading…
10
Heatmap to show cell counts
#344 opened May 23, 2025 by georgezakinih Contributor Loading…
1
feat(core): added compare_annotations function and unit tests
#336 opened May 1, 2025 by arshnrr Contributor Loading…
2
Adding Pin Colors to Dimensionality Reduction Plot
#334 opened Apr 28, 2025 by LizaShch Loading…
Adding Pin Colors to Scatterplot
#333 opened Apr 28, 2025 by LizaShch Loading…
Datashader Heatmap Visualization Function
#330 opened Apr 17, 2025 by LizaShch Loading…
7
Adding Pin_Colors to Histogram
#329 opened Apr 17, 2025 by LizaShch Loading…
Histogram facet plot
#328 opened Apr 15, 2025 by ying39purdue Contributor Loading…
1
Add example usage lymph node data and notebooks
#326 opened Apr 14, 2025 by fangliu117 Collaborator Loading…
4
ProTip! Exclude everything labeled bug with -label:bug.