SSN workflow

my workflow to create a sequence similarity network for a given protein family using John Chen's ProteinClusterTools https://github.com/johnchen93/ProteinClusterTools/tree/main

Name		Name	Last commit message	Last commit date
Latest commit History 13 Commits
1_run_pipeline.ipynb		1_run_pipeline.ipynb
2_hierarchical_cluster_plot.ipynb		2_hierarchical_cluster_plot.ipynb
3_UMAP_plot.ipynb		3_UMAP_plot.ipynb
4_representative_selection.ipynb		4_representative_selection.ipynb
5_tree_structure.ipynb		5_tree_structure.ipynb
Jack_SSNPipeline.ipynb		Jack_SSNPipeline.ipynb
New_cluster_Plot.ipynb		New_cluster_Plot.ipynb
README.md		README.md
input.fasta		input.fasta

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