ASK/TELL DEVELOP - #1307

Merged

jlnav merged 660 commits into

experimental/jlnav_plus_shuds_asktell

Mar 3, 2026

This pull request is big! We're only showing the most recent 250 commits

Commits on Jul 25, 2025

add parameter for UniformSample, instructing the generator to squash all of VOCS.variables down to single "x"
jlnav
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9b1195b

Commits on Aug 6, 2025

Commits on Aug 13, 2025

various fixes from PR suggestions
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0bcd7c9

Commits on Aug 14, 2025

move gpcam superclass init to top of init, make UniformSample accept random seed
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bf9ed05
gpcam asserts objectives, then a better description of variables_mapping
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acc4811

Commits on Aug 15, 2025

move _validate_vocs call to superclass
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2a67724

Commits on Aug 18, 2025

Merge pull request #1572 from Libensemble/asktell/VOCS
jlnav
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8c9e313

Commits on Aug 19, 2025

Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
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6b54991

Commits on Aug 21, 2025

Commits on Aug 22, 2025

small fixes
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1dce059
docstring for APOSMM class
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77845a0
Fix finalize and export functions
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9b3429b
Option to export with user fields
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a2c58fc
evaluate an APOSMM with only VOCS passed in
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2635236

Commits on Aug 25, 2025

Add unit tests of unmap_numpy_array
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012227a
Remove unneeded branch
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03420b3
Add expected variables mapping for APOSMM
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682425a
Better example bounds
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b209901
Allow pass through of unmapped arrays
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fd630eb
Allow export as list of dictionaries
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57a8de9
Add pass-through array to unmap test
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050c22d
Add export unit tests and fix up unmap
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5d31b63
Re-enable APOSMM unit tests
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d1d4b76
Add checks for x and x_on_cube
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b05762a
Add export tests and fixup
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0b8cdec

Commits on Aug 26, 2025

replace completely-typed out gen_specs['user'] update from parameters with loop over fields and grabbing the value from locals, as suggested by shuds
jlnav
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4e73c93

Commits on Aug 27, 2025

coverage adjusts
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4357173
Do not send local_min/pt to ingest
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1e52d99

Commits on Aug 28, 2025

Autofill x and f variables_mapping separately
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3c21202

Commits on Aug 29, 2025

Update asktell APOSMM regression test
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1cb542f

Commits on Sep 5, 2025

Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
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9798b3e

Commits on Sep 22, 2025

Add fvec when components is present
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585c521
Send APOSMM errors as a string
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cf36e85

Commits on Oct 1, 2025

Formatting
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77efa2a
Blacken
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ed6604d
Clarify comment
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9cbca1e
Update generator_standard to gest_api
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ec773d4
Fix gest-api in pyproject
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5ea9b2b
Fix gest project name
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b14b85d
Fix _validate_vocs for gpCAM
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f8d1833

Commits on Oct 2, 2025

Remove misleading n
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Merge pull request #1582 from Libensemble/feature/update_finalize
shuds13
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a383dc0

Commits on Oct 23, 2025

Commits on Oct 24, 2025

fixes and refactors as suggested by shuds - *works on multistage lpa*
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b828cb4

Commits on Oct 31, 2025

fix generator-standard package name in pyproject.toml
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41a4cbc

Commits on Nov 6, 2025

also start running thread upon initial ingest
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3e41b4b

Commits on Nov 11, 2025

mostly just trying the current aposmm.py with Xopt in this commit...
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473487d

Commits on Nov 12, 2025

Commits on Nov 13, 2025

add unit test where APOSMM class ingests first
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5dc5155

Commits on Nov 14, 2025

Commits on Nov 19, 2025

adjusts send-conditions upon full sample being ingested. adjusts warning message. appends _id to sim_id mapping in generators.py and removes the associated pop in misc.py
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additional docs
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Add Xopt EI test
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c07611d
Restructure imports
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f39b937
Set batch size and fix nworkers
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fb9b01d
Make temp note on fixing nworkers
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e88088f
Restructure gen_specs
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57b466e
Change sim to xopt test sim
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da20d5a
Add vocs field to GenSpecs
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e5ff70d
Add vocs field to SimSpecs
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Get vocs field type
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tentative refactor of do_not_produce_sample_points keyword to be the inverse
jlnav
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Add unit tests for set_fields_from_vocs
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Test array type
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doing "generate_sample_points". ensuring sim_id gets cast as int (for using as indexes later). need to accomodate circumstance where we have set up a sim_id <- _id mapping, but no input _id data is…
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95bc6a0

Commits on Nov 20, 2025

Commits on Nov 21, 2025

always map _id to sim_id. add simple executor + UniformSample test. clarifying comments
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4dbfc42
put the executor.comm adjustment back - and add a asktell aposmm + executor test
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f4f6b96
other MPI processes attempting to finalize their gen is problematic
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2c28939
Add array dtype support
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00bbebe
Update vocs sampling tests
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379868d
Remove redundant line
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1c1e996
Remove another redundant line
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f6b2ce2
Formatting
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4ed9efd

Commits on Nov 22, 2025

Add gest_api simulator wrapper
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a02e8d4
Add version of xopt test that uses xopt simulator
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104424e
Fix naming
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52d32a6

Commits on Nov 25, 2025

Fix test for array fields
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561ba54
Disable awkward array test
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7f4a4ee
Give output assert to xopt tests
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3de1de5
Fix formatting
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3b21fe0
Merge pull request #1622 from Libensemble/examples/xopt_generators_remove_auto_mapping
shuds13
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a11e04d
Add Optimas grid sample test
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5800c93

Commits on Nov 26, 2025

Infer type of discrete vars
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253efea

Commits on Dec 1, 2025

tweaks based on PR feedback
jlnav
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4fda921

Commits on Dec 2, 2025

Re-enamble model tests
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abdf4a6
Add xopt sequential test
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6ac2880

Commits on Dec 3, 2025

Do not ingest None
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6d649a3
Simplify xopt nelder mead test and assert
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56db443
Correct procs count for when use parse_args
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4a47d2f
Add xopt and optimas to extra CI
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aabcf15
Formatting
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d345dce
Fix install
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fcb1af2
Test xopt/optimas gens on basic tests
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31f0778
doc/docstring additional tweaks and clarifications
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548f580
bump polling_loop interval for (perhaps) slower containers/VMs/systems (like the macOS jobs)
jlnav
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aaac936
set the sim_ids of the ingest_buf right when we're about to send it to the gen_f. add a initialize_dists_and_inds call upon the initial sample being ingested in, inside update_local_H_after_receiving
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e9fa694

Commits on Dec 4, 2025

Fixing CI for xopt/optimas generator tests (#1626)
shuds13
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0b41dab
Clean up
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Add xopt notebook
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Add xopt example to docs
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Add new tutorial to main toctree
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55c346c
Rename example
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Rename and add colab link
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f4af3a6
Improve layout
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cccd3bb

Commits on Dec 8, 2025

Add xopt/forces example
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Enable gest-api simulator to use executor
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Fix user_specs naming
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c8e6d62

Commits on Dec 9, 2025

Commits on Dec 10, 2025

Ensure gens with _id return with sim_id
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97287d4
Add Optimas Ax test
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d78856b

Commits on Dec 12, 2025

Add working multi-task test
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c60ad27
Target Optimas branch for testing
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1e341b9
Add tests with single/multi fidelity and multitask gens
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a79eb56
Remove old optimas test
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b4dbc7d
Make _id to sim_id more robust
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eeabf3f
Handle empty dictionary
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Formatting tests
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04a0565
Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
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d847490
typo
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1fd96dc

Commits on Dec 16, 2025

Ingest initial H0 for gest-api generators
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Multitask test uses H0
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cd15f07

Commits on Dec 18, 2025

Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
jlnav
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ea9c35c

Commits on Jan 7, 2026

Fix test naming
shuds13
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e7fef19
initial small changes to add returns_id attribute to APOSMM class
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d12f53d
adjust README intro sample to use standard gen, VOCS
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Commits on Jan 8, 2026

Commits on Jan 9, 2026

Commits on Jan 14, 2026

Commits on Jan 15, 2026

Merge branch 'experimental/jlnav_plus_shuds_asktell' into asktell/emphasize_asktell_gens
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618c7cf
small fixes, plus display some ask/tell aposmm examples in the docs
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list gpcam example
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Commits on Jan 16, 2026

monocasing, plus a clarification
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linenos
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starting to rewrite the first tutorial for standardized gens
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remove some redundancy
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Commits on Jan 21, 2026

link to xopt/optimas generators in docs - also try only doc'ing suggest/ingest/export/finalize for our generators instead of suggest/ingest_numpy
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b52eff8

Commits on Jan 28, 2026

note the third party gens are examples - adjust xopt file paths to main branch
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add gest-api pypi release as required dependency
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Merge branch 'develop' into asktell/gest-api-release
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Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
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lock scipy version until pixi changes implemented into extra.yml
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lock to version from a bit ago
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remove lock...?
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Commits on Jan 29, 2026

Merge branch 'experimental/jlnav_plus_shuds_asktell' into asktell/emphasize_asktell_gens
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Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
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Merge branch 'experimental/jlnav_plus_shuds_asktell' into asktell/gest-api-release
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5436672
fix psutil version on macos in lockfile
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be014c7
Merge pull request #1666 from Libensemble/asktell/gest-api-release
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1b3165b
unbump ax
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Commits on Feb 4, 2026

Merge branch 'develop' into asktell/emphasize_asktell_gens
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d714127

Commits on Feb 6, 2026

Commits on Feb 9, 2026

Add _id field when id producing gen
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Handle _id as own field
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Make test_optimas_ax_multitask.py local only
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c4110ab

Commits on Feb 10, 2026

Merge from upstream
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Formatting update
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Formatting
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Update xopt branch
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Merge branch 'develop' into experimental/jlnav_plus_shuds_asktell
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Put back _id to sim_id fixup
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Commits on Feb 11, 2026

Merge from upstream
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d338a98
fix generator.vocs attribute to be lowercase throughout. fix bugged lockfile url to gest-api package
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Merge branch 'experimental/jlnav_plus_shuds_asktell' into examples/optimas_ax_generators
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add optimas to all extra envs. add xopt to py3.11+ envs
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since xopt and optimas now included in envs, remove xopt tests on python 3.10
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use main branch of optimas instead of release
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forgot an e
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grab develop's run-tests.py
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why are these tests complaining about reusing an ensemble dir
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pass the instance, not the parent class that was included for typing purposes
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Exclude multitask
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Commits on Feb 12, 2026

Commits on Feb 13, 2026

Commits on Feb 18, 2026

history.py:
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Commits on Feb 19, 2026

exclude optimas ax tests on macos
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remove optimas-ax tests from newer python extended tests
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Commits on Feb 20, 2026

Commits on Feb 25, 2026

Merge branch 'experimental/jlnav_plus_shuds_asktell' into asktell/aposmm_reg_test_vocs
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dependency and expected-error-condition tweaks
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lock to previous petsc version
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Commits on Feb 27, 2026

Merge pull request #1679 from Libensemble/asktell/aposmm_reg_test_vocs
shuds13
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9ab4f93

Commits on Mar 2, 2026

Commits on Mar 3, 2026

fix tutorial code
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typo
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lock ax again, point to optimas branch
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disable xopt install/tests for now
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Merge pull request #1684 from Libensemble/asktell/ax
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