Skip to content
@PDCMFinder

PDCMFinder

Popular repositories Loading

  1. pdxfinder pdxfinder Public

    PDX Finder performs integration, standardization, analysis and visualization of the complex and diverse data associated with PDX mouse models for the cancer community.

    Java 8 6

  2. cancer-models cancer-models Public

    CancerModels.Org web portal code base

    TypeScript 5 1

  3. PdcmDataTransformers PdcmDataTransformers Public

    Jupyter notebooks and python code for more of the bespoke data tranformations

    Jupyter Notebook 4

  4. pdcm-etl pdcm-etl Public

    ETL process for the PDCM project

    Python 2 1

  5. pdcm-lectern-validator pdcm-lectern-validator Public

    Template validator service for PDCM Finder using Lectern

    TypeScript 2

  6. mutation-annotater mutation-annotater Public

    annotation pipeline for PDXFinder mut and cna templates using VEP

    Python 1

Repositories

Showing 10 of 36 repositories
  • cancer-models Public

    CancerModels.Org web portal code base

    PDCMFinder/cancer-models’s past year of commit activity
    TypeScript 5 Apache-2.0 1 10 0 Updated Dec 9, 2025
  • pdcm-submission Public

    Data submission portal for CancerModels.org. It helps users in getting familiar with the data model and validating their submission.

    PDCMFinder/pdcm-submission’s past year of commit activity
    TypeScript 0 AGPL-3.0 0 0 0 Updated Nov 19, 2025
  • pdcm-etl Public

    ETL process for the PDCM project

    PDCMFinder/pdcm-etl’s past year of commit activity
    Python 2 Apache-2.0 1 13 0 Updated Nov 19, 2025
  • cancer-models-pages Public

    CancerModels.Org web portal code base for GitHub pages

    PDCMFinder/cancer-models-pages’s past year of commit activity
    TypeScript 0 Apache-2.0 0 1 1 Updated Sep 5, 2025
  • bio-studies-submission Public

    Prepares CancerModels.Org data to be ready to submit to BioStudies

    PDCMFinder/bio-studies-submission’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Aug 1, 2025
  • pdx-transformer Public

    Repository for all modules used for transforming provider database schema to PDX Finder's datamodel

    PDCMFinder/pdx-transformer’s past year of commit activity
    Java 0 1 0 0 Updated May 21, 2025
  • validator Public

    Template validator microservice use for PDX Finder

    PDCMFinder/validator’s past year of commit activity
    Java 0 0 0 0 Updated May 21, 2025
  • data-dashboard Public
    PDCMFinder/data-dashboard’s past year of commit activity
    Python 0 MIT 0 0 0 Updated May 20, 2025
  • pdcm-str-profiler Public
    PDCMFinder/pdcm-str-profiler’s past year of commit activity
    Dockerfile 0 0 0 0 Updated May 20, 2025
  • PdcmDataTransformers Public

    Jupyter notebooks and python code for more of the bespoke data tranformations

    PDCMFinder/PdcmDataTransformers’s past year of commit activity
    Jupyter Notebook 4 0 1 0 Updated May 19, 2025
View all repositories

Most used topics

Loading…