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1. NBISweden/DNAharvester NBISweden/DNAharvester Public

   DNAharvester: A Nextflow Pipeline for Analysing Highly Degraded DNA from Ancient and Historical Specimens

   Nextflow 12

2. CpgSthlm/MitoDate CpgSthlm/MitoDate Public

   Nextflow pipeline to perform molecular clock dating of ancient mitochondrial genomes using BEAST

   Python 1

3. iterative_mapping iterative_mapping Public

   Nextflow pipeline for iterative mapping of nuclear genomes

   Nextflow

4. AdaptClean AdaptClean Public

   removes residual adapter sequences for single-end reads

   C++

5. dna-capture-probes-design dna-capture-probes-design Public

   it includes scripts to design hybridization probes to capture genome-wide nuclear SNPs, missense mutations, and indels.

   Python

6. SNP2NET SNP2NET Public

   It Creates an interactive circular phylogenetic network from SNP data using Neighbor-Joining.

   Python