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Can't write to h5ad/h5

Status: Open.

#341 In bnprks/BPCells;

· smithcathy opened on Jun 25, 2026

[ method on TransformLog1pSlow class throws an error on linux.

Status: Open.

#340 In bnprks/BPCells;

· Artur-man opened on Jun 21, 2026

Issue building from source for R

Status: Open.

#333 In bnprks/BPCells;

· verdurin opened on Feb 20, 2026

Issues with threading

Status: Open.

#327 In bnprks/BPCells;

· jetrz opened on Dec 4, 2025

Matrix limit crash during merge on IterableMatrix

Status: Open.

#325 In bnprks/BPCells;

· sara-leka opened on Dec 2, 2025

mask_matrix invert = T not working

Status: Open.

#324 In bnprks/BPCells;

· Wenhe-Lin opened on Nov 25, 2025

Reading non-integer matrices in python

Status: Open.

#312 In bnprks/BPCells;

· eyalbenda opened on Oct 22, 2025

cannot install BPCells package on Linux(Centos7)

Status: Open.

#310 In bnprks/BPCells;

· BoTang1 opened on Oct 15, 2025

Allow the use of relative paths in open_matrix_dir/open_fragments_dir

Status: Open.

#309 In bnprks/BPCells;

· bjmt opened on Sep 28, 2025

Peak Calling with macs2

Status: Open.

#307 In bnprks/BPCells;

· plbngl opened on Sep 23, 2025

matrix_stats() breaks with multiple threads in some cases, when single threaded still works

Status: Open.

#306 In bnprks/BPCells;

· immanuelazn opened on Sep 20, 2025

matrix with no cells

Status: Open.

#305 In bnprks/BPCells;

· brgew opened on Sep 18, 2025