Dev - #4

Merged

ecrum19 merged 19 commits into

mainfrom

Sep 4, 2026

Commits on Aug 27, 2026

two bug fixes
ecrum19
committed
e8e19bf
added hdt/cottas index-only functionality
ecrum19
committed
ef12512
fix full mode fail on hdt-index failure
ecrum19
committed
9506141
hdt indexing feature fix
ecrum19
committed
8c11f83

Commits on Aug 29, 2026

fix partition bug with big compressed intermediates
ecrum19
committed
0d4f7ce

Commits on Sep 1, 2026

add condensed mode for large multi-sample VCF knowledge representation
ecrum19
committed
acc079b

Commits on Sep 2, 2026

remove legacy java hdtcat invocation
ecrum19
committed
5caef5d
improved condensed COTTAS index generation workflow
ecrum19
committed
87ad26d

Commits on Sep 3, 2026

improved condensed COTTAS index generation workflow 2
ecrum19
committed
7f46113
cottas condensed index fix
ecrum19
committed
bbae36c
cottas condensed index fix 2
ecrum19
committed
b6d17c0
cottas condensed index fix and loading bar addition
ecrum19
committed
a3aec0f
increased upper limit of memory allocation for cottas compression
ecrum19
committed
ed8c9ef
increased upper limit of memory allocation for cottas compression
ecrum19
committed
6a5b549

Commits on Sep 4, 2026