Sync `upstream/nanobeam` with `upstream/dev` so that @ehrhardtkm can push PDF#178

Merged

bobleesj merged 58 commits intonanobeamfrom

nanobeam-bob-pr-cleanup

Feb 20, 2026

Commits on Dec 2, 2025

adding dense NN and cnn_dense NN
arthurmccray
committed

Commits on Dec 17, 2025

refactoring and adding docstrings to core ml code
arthurmccray
committed

Commits on Jan 5, 2026

changing setting device to cpu resets to gpu0 as well
arthurmccray
committed

Commits on Jan 6, 2026

adding torchinfo for summaries of models. also changing denseNN to not cache the activation function
arthurmccray
committed
fixing the activation function caching for CNNs
arthurmccray
committed
cleaning up HSiren and CNNDense networks
arthurmccray
committed

Commits on Jan 8, 2026

minor changes to autoencoder formatting
arthurmccray
committed

Commits on Jan 9, 2026

bugfix that was causing torch to be initialized to gpu by default. reverting back to previous implementation
arthurmccray
committed

Commits on Jan 12, 2026

Merge branch 'dev' into ml
arthurmccray
committed

Commits on Jan 15, 2026

Merge branch 'dev' into ml
arthurmccray
committed

Commits on Jan 17, 2026

Commits on Jan 18, 2026

center grid prior to rotating
gvarnavi
committed

Commits on Jan 19, 2026

chore: update lock file
quantem-bot
committed

Commits on Jan 20, 2026

Commits on Jan 22, 2026

Commits on Jan 23, 2026

Commits on Feb 2, 2026

Commits on Feb 3, 2026

Fix type hints for modify_in_place overloads in Dataset
arthurmccray
committed

Commits on Feb 4, 2026

Merge pull request #171 from electronmicroscopy/fix/dataset-type-hints
gvarnavi
authored

Commits on Feb 9, 2026

chore: update lock file
quantem-bot
committed

Commits on Feb 14, 2026

Merge pull request #173 from electronmicroscopy/chore/update-lockfile-20260209
gvarnavi
authored

Commits on Feb 16, 2026

Commits on Feb 20, 2026

update upstream nanobeam branch with upstream dev Feb 19, 2025
bobleesj
committed