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Staging #519

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17bb82a
Reprocess notebooks from PR #516
actions-user Jul 17, 2026
a889d02
Merge pull request #518 from neuromatch/reprocess-pr516-20260717062844
iamzoltan Jul 18, 2026
1aa8fdc
Pin versions
iamzoltan Jul 18, 2026
9aecb31
Process tutorial notebooks (some notebooks moved to follow-up PR)
actions-user Jul 18, 2026
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2 changes: 1 addition & 1 deletion requirements.txt
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Expand Up @@ -11,7 +11,7 @@ ipywidgets==8.1.2
requests==2.31.0
scikit-learn==1.4.1.post1
scikit-image==0.19.2
tqdm==4.66.2
tqdm==4.64.1
protobuf==3.20.*
numba==0.59.0
sentencepiece==0.2.0
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4 changes: 2 additions & 2 deletions tutorials/W1D2_ComparingTasks/W1D2_Tutorial1.ipynb
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"cells": [
{
"cell_type": "markdown",
"id": "aec0e5ff",
"id": "4772a65b",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -126,7 +126,7 @@
"source": [
"# @title Install and import feedback gadget\n",
"\n",
"!pip install vibecheck numpy matplotlib torch torchvision tqdm ipywidgets memory-profiler requests scikit-learn torchmetrics --quiet\n",
"!pip install --quiet vibecheck numpy==1.26.4 matplotlib==3.8.3 torch torchvision==0.16 tqdm==4.66.2 ipywidgets==8.1.2 memory_profiler requests==2.31.0 scikit-learn==1.4.1.post1 torchmetrics\n",
"\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
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4 changes: 2 additions & 2 deletions tutorials/W1D2_ComparingTasks/instructor/W1D2_Tutorial1.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "1aa8664f",
"id": "78732845",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -126,7 +126,7 @@
"source": [
"# @title Install and import feedback gadget\n",
"\n",
"!pip install vibecheck numpy matplotlib torch torchvision tqdm ipywidgets memory-profiler requests scikit-learn torchmetrics --quiet\n",
"!pip install --quiet vibecheck numpy==1.26.4 matplotlib==3.8.3 torch torchvision==0.16 tqdm==4.66.2 ipywidgets==8.1.2 memory_profiler requests==2.31.0 scikit-learn==1.4.1.post1 torchmetrics\n",
"\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
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4 changes: 2 additions & 2 deletions tutorials/W1D2_ComparingTasks/student/W1D2_Tutorial1.ipynb
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"cells": [
{
"cell_type": "markdown",
"id": "8d57d318",
"id": "27c1df71",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -126,7 +126,7 @@
"source": [
"# @title Install and import feedback gadget\n",
"\n",
"!pip install vibecheck numpy matplotlib torch torchvision tqdm ipywidgets memory-profiler requests scikit-learn torchmetrics --quiet\n",
"!pip install --quiet vibecheck numpy==1.26.4 matplotlib==3.8.3 torch torchvision==0.16 tqdm==4.66.2 ipywidgets==8.1.2 memory_profiler requests==2.31.0 scikit-learn==1.4.1.post1 torchmetrics\n",
"\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
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8 changes: 4 additions & 4 deletions tutorials/W2D2_NeuroSymbolicMethods/W2D2_Tutorial1.ipynb
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"cells": [
{
"cell_type": "markdown",
"id": "b7f96f23",
"id": "27ea6096",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -93,9 +93,9 @@
"# @title Install and import feedback gadget\n",
"\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --quiet\n",
"!pip install numpy==1.24.4\n",
"!pip install nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib ipywidgets scipy vibecheck\n",
"!pip install -q numpy==1.24.4\n",
"!pip install -q nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 scipy==1.12.0 vibecheck\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
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14 changes: 7 additions & 7 deletions tutorials/W2D2_NeuroSymbolicMethods/W2D2_Tutorial2.ipynb
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"cells": [
{
"cell_type": "markdown",
"id": "941a5f06",
"id": "15fb77d2",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -92,13 +92,13 @@
"source": [
"# @title Install dependencies\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install scikit-learn==1.6.1 --quiet\n",
"!pip install scipy==1.15.3 --quiet\n",
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet scikit-learn==1.6.1\n",
"!pip install --quiet scipy==1.15.3\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --no-deps --quiet\n",
"!pip install nengo==4.0.0 --quiet\n",
"!pip install nengo_spa==2.0.0 --quiet\n",
"!pip install --quiet matplotlib ipywidgets vibecheck"
"!pip install --quiet nengo==4.0.0\n",
"!pip install --quiet nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 vibecheck"
]
},
{
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8 changes: 4 additions & 4 deletions tutorials/W2D2_NeuroSymbolicMethods/W2D2_Tutorial3.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "a5cf3722",
"id": "a0f73116",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -90,9 +90,9 @@
"source": [
"# @title Install dependencies\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install nengo nengo-spa nengo-gui --quiet\n",
"!pip install matplotlib vibecheck --quiet"
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet nengo nengo_spa nengo_gui\n",
"!pip install --quiet matplotlib==3.8.3 vibecheck"
]
},
{
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16 changes: 8 additions & 8 deletions tutorials/W2D2_NeuroSymbolicMethods/W2D2_Tutorial4.ipynb
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"cells": [
{
"cell_type": "markdown",
"id": "99b42814",
"id": "ee004627",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -88,14 +88,14 @@
"source": [
"# @title Install dependencies and import feedback gadget\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install scikit-learn==1.6.1 --quiet\n",
"!pip install scipy==1.15.3 --quiet\n",
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet scikit-learn==1.6.1\n",
"!pip install --quiet scipy==1.15.3\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --no-deps --quiet\n",
"!pip install nengo==4.0.0 --quiet\n",
"!pip install nengo_spa==2.0.0 --quiet\n",
"!pip install --quiet matplotlib ipywidgets vibecheck\n",
"!pip install --quiet numpy matplotlib ipywidgets scipy scikit-learn vibecheck\n",
"!pip install --quiet nengo==4.0.0\n",
"!pip install --quiet nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 vibecheck\n",
"!pip install --quiet numpy==1.26.4 matplotlib==3.8.3 ipywidgets==8.1.2 scipy==1.12.0 scikit-learn==1.4.1.post1 vibecheck\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
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8 changes: 4 additions & 4 deletions tutorials/W2D2_NeuroSymbolicMethods/instructor/W2D2_Tutorial1.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "c1c38a29",
"id": "8f5b20ac",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -93,9 +93,9 @@
"# @title Install and import feedback gadget\n",
"\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --quiet\n",
"!pip install numpy==1.24.4\n",
"!pip install nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib ipywidgets scipy vibecheck\n",
"!pip install -q numpy==1.24.4\n",
"!pip install -q nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 scipy==1.12.0 vibecheck\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
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14 changes: 7 additions & 7 deletions tutorials/W2D2_NeuroSymbolicMethods/instructor/W2D2_Tutorial2.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "778bee58",
"id": "6aa95361",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -92,13 +92,13 @@
"source": [
"# @title Install dependencies\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install scikit-learn==1.6.1 --quiet\n",
"!pip install scipy==1.15.3 --quiet\n",
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet scikit-learn==1.6.1\n",
"!pip install --quiet scipy==1.15.3\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --no-deps --quiet\n",
"!pip install nengo==4.0.0 --quiet\n",
"!pip install nengo_spa==2.0.0 --quiet\n",
"!pip install --quiet matplotlib ipywidgets vibecheck"
"!pip install --quiet nengo==4.0.0\n",
"!pip install --quiet nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 vibecheck"
]
},
{
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8 changes: 4 additions & 4 deletions tutorials/W2D2_NeuroSymbolicMethods/instructor/W2D2_Tutorial3.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "1101064f",
"id": "2687b3f3",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -90,9 +90,9 @@
"source": [
"# @title Install dependencies\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install nengo nengo-spa nengo-gui --quiet\n",
"!pip install matplotlib vibecheck --quiet"
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet nengo nengo_spa nengo_gui\n",
"!pip install --quiet matplotlib==3.8.3 vibecheck"
]
},
{
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16 changes: 8 additions & 8 deletions tutorials/W2D2_NeuroSymbolicMethods/instructor/W2D2_Tutorial4.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "60a54fe5",
"id": "81f06bdf",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -88,14 +88,14 @@
"source": [
"# @title Install dependencies and import feedback gadget\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install scikit-learn==1.6.1 --quiet\n",
"!pip install scipy==1.15.3 --quiet\n",
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet scikit-learn==1.6.1\n",
"!pip install --quiet scipy==1.15.3\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --no-deps --quiet\n",
"!pip install nengo==4.0.0 --quiet\n",
"!pip install nengo_spa==2.0.0 --quiet\n",
"!pip install --quiet matplotlib ipywidgets vibecheck\n",
"!pip install --quiet numpy matplotlib ipywidgets scipy scikit-learn vibecheck\n",
"!pip install --quiet nengo==4.0.0\n",
"!pip install --quiet nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 vibecheck\n",
"!pip install --quiet numpy==1.26.4 matplotlib==3.8.3 ipywidgets==8.1.2 scipy==1.12.0 scikit-learn==1.4.1.post1 vibecheck\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
Expand Down
8 changes: 4 additions & 4 deletions tutorials/W2D2_NeuroSymbolicMethods/student/W2D2_Tutorial1.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "d8a5a7f0",
"id": "249ece4d",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -93,9 +93,9 @@
"# @title Install and import feedback gadget\n",
"\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --quiet\n",
"!pip install numpy==1.24.4\n",
"!pip install nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib ipywidgets scipy vibecheck\n",
"!pip install -q numpy==1.24.4\n",
"!pip install -q nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 scipy==1.12.0 vibecheck\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
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14 changes: 7 additions & 7 deletions tutorials/W2D2_NeuroSymbolicMethods/student/W2D2_Tutorial2.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "57325843",
"id": "eedc9ca1",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -92,13 +92,13 @@
"source": [
"# @title Install dependencies\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install scikit-learn==1.6.1 --quiet\n",
"!pip install scipy==1.15.3 --quiet\n",
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet scikit-learn==1.6.1\n",
"!pip install --quiet scipy==1.15.3\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --no-deps --quiet\n",
"!pip install nengo==4.0.0 --quiet\n",
"!pip install nengo_spa==2.0.0 --quiet\n",
"!pip install --quiet matplotlib ipywidgets vibecheck"
"!pip install --quiet nengo==4.0.0\n",
"!pip install --quiet nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 vibecheck"
]
},
{
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8 changes: 4 additions & 4 deletions tutorials/W2D2_NeuroSymbolicMethods/student/W2D2_Tutorial3.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "fe28e5f6",
"id": "dfe6dfd6",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -90,9 +90,9 @@
"source": [
"# @title Install dependencies\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install nengo nengo-spa nengo-gui --quiet\n",
"!pip install matplotlib vibecheck --quiet"
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet nengo nengo_spa nengo_gui\n",
"!pip install --quiet matplotlib==3.8.3 vibecheck"
]
},
{
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16 changes: 8 additions & 8 deletions tutorials/W2D2_NeuroSymbolicMethods/student/W2D2_Tutorial4.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "fcfbad24",
"id": "fca2f9e0",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -88,14 +88,14 @@
"source": [
"# @title Install dependencies and import feedback gadget\n",
"\n",
"!pip install numpy==1.24.4 --quiet\n",
"!pip install scikit-learn==1.6.1 --quiet\n",
"!pip install scipy==1.15.3 --quiet\n",
"!pip install --quiet numpy==1.24.4\n",
"!pip install --quiet scikit-learn==1.6.1\n",
"!pip install --quiet scipy==1.15.3\n",
"!pip install git+https://github.com/neuromatch/sspspace@neuromatch --no-deps --quiet\n",
"!pip install nengo==4.0.0 --quiet\n",
"!pip install nengo_spa==2.0.0 --quiet\n",
"!pip install --quiet matplotlib ipywidgets vibecheck\n",
"!pip install --quiet numpy matplotlib ipywidgets scipy scikit-learn vibecheck\n",
"!pip install --quiet nengo==4.0.0\n",
"!pip install --quiet nengo_spa==2.0.0\n",
"!pip install --quiet matplotlib==3.8.3 ipywidgets==8.1.2 vibecheck\n",
"!pip install --quiet numpy==1.26.4 matplotlib==3.8.3 ipywidgets==8.1.2 scipy==1.12.0 scikit-learn==1.4.1.post1 vibecheck\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
Expand Down
4 changes: 2 additions & 2 deletions tutorials/W2D5_Mysteries/W2D5_Tutorial1.ipynb
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Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
"id": "b8cb858d",
"id": "0c851b6c",
"metadata": {
"colab_type": "text",
"execution": {},
Expand Down Expand Up @@ -105,7 +105,7 @@
"source": [
"# @title Install and import feedback gadget\n",
"\n",
"!pip install vibecheck numpy matplotlib Pillow torch torchvision transformers ipywidgets gradio trdg scikit-learn networkx pickleshare seaborn tabulate --quiet\n",
"!pip install --quiet vibecheck numpy==1.26.4 matplotlib==3.8.3 Pillow==10.2.0 torch torchvision==0.16 transformers==4.38.1 ipywidgets==8.1.2 gradio==4.19.2 trdg scikit-learn==1.4.1.post1 networkx==3.2.1 pickleshare seaborn tabulate\n",
"\n",
"from vibecheck import DatatopsContentReviewContainer\n",
"def content_review(notebook_section: str):\n",
Expand Down
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