Branch to accumulate minor fixes from Summit training - #945

Merged

vdauwera merged 27 commits into

masterfrom

gvda-bos-summit-fixes-apr26

Jul 6, 2026

Commits on Apr 27, 2026

Fix stale .md cross-references to renamed side quests
robsyme
committed
4472208
Fix links to metadata and wow SQ
vdauwera
committed
6f38472
Add index.md to the side quest links
vdauwera
committed
8fa379a
Merge branch 'master' into fix/stale-side-quest-md-links
vdauwera
authored
b7c31e9
Merge branch 'gvda-fix-links-hnf-rewrite' into fix/stale-side-quest-md-links
vdauwera
committed
1f7f351
Merge branch 'fix/stale-side-quest-md-links' of https://github.com/nextflow-io/training into fix/stale-side-quest-md-links
vdauwera
committed
f7f9cce
One more link fix
vdauwera
committed
bb59caa
Make all internal links point to the file
vdauwera
committed
5a24fb0

Commits on Apr 28, 2026

Commits on Jul 6, 2026

fix(working_with_files): correct hl_lines and stale comment in side quest
vdauwera
committed
b939f85
Merge remote-tracking branch 'origin/master' into gvda-bos-summit-fixes-apr26
vdauwera
committed
10cfcba
minor tweaks
vdauwera
committed
226d046
fix(metadata): correct hl_lines and heading backtick consistency
vdauwera
committed
3abd1b5
fix(splitting_and_grouping): correct hl_lines, broken filter snippet, and backtick
vdauwera
committed
14ea3b5
fix(metadata): correct explanation of meta map key when CSV column is missing
vdauwera
committed
eb43867
fix(splitting_and_grouping): correct sample naming and missing comma in illustrative snippet
vdauwera
committed
7c71264
fix: three instructional inconsistencies across side quests
vdauwera
committed
0eb0050
fix(splitting_and_grouping): finish sampleA/B/C -> patientA/B/C cleanup
vdauwera
committed
8ab2966
fix(working_with_files): consistently use patient as the destructured variable name
vdauwera
committed
6dcb547
fix: align channel variable names in summaries with lesson body convention
vdauwera
committed
1b95aa2
fix: consistency issues found in nf_test, workflows_of_workflows, dev_environment
vdauwera
committed
9b5c92d
docs(nf_test): add version-requirement note for nf-test compatibility
vdauwera
committed
714a365
fix(hello_nextflow): correct resume example, before-snippet, and output paths

vdauwera
and
claude
committed
01d716e
fix(hello_nf-core): correct doc/behavior mismatches found via container walkthrough

vdauwera
and
claude
committed
33bf0e7

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Branch to accumulate minor fixes from Summit training - #945

Branch to accumulate minor fixes from Summit training#945
vdauwera merged 27 commits into
masterfrom
gvda-bos-summit-fixes-apr26

Commits on Apr 27, 2026

Fix stale .md cross-references to renamed side quests

Fix links to metadata and wow SQ

Add index.md to the side quest links

Merge branch 'master' into fix/stale-side-quest-md-links

Merge branch 'gvda-fix-links-hnf-rewrite' into fix/stale-side-quest-md-links

Merge branch 'fix/stale-side-quest-md-links' of https://github.com/nextflow-io/training into fix/stale-side-quest-md-links

One more link fix

Make all internal links point to the file

Commits on Apr 28, 2026

Fix remaining broken links

last links to fix (I live in hope)

Minor fixes to the training docs

Merge branch 'master' into gvda-bos-summit-fixes-apr26

Commits on Jul 6, 2026

fix(working_with_files): correct hl_lines and stale comment in side quest

Merge remote-tracking branch 'origin/master' into gvda-bos-summit-fixes-apr26

minor tweaks

fix(metadata): correct hl_lines and heading backtick consistency

fix(splitting_and_grouping): correct hl_lines, broken filter snippet, and backtick

fix(metadata): correct explanation of meta map key when CSV column is missing

fix(splitting_and_grouping): correct sample naming and missing comma in illustrative snippet

fix: three instructional inconsistencies across side quests

fix(splitting_and_grouping): finish sampleA/B/C -> patientA/B/C cleanup

fix(working_with_files): consistently use patient as the destructured variable name

fix: align channel variable names in summaries with lesson body convention

fix: consistency issues found in nf_test, workflows_of_workflows, dev_environment

docs(nf_test): add version-requirement note for nf-test compatibility

fix(hello_nextflow): correct resume example, before-snippet, and output paths

fix(hello_nf-core): correct doc/behavior mismatches found via container walkthrough