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Important! Template update for nf-core/tools v3.3.2#93

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khersameesh24 merged 10 commits into
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nf-core-template-merge-3.3.2
Sep 10, 2025
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Important! Template update for nf-core/tools v3.3.2#93
khersameesh24 merged 10 commits into
devfrom
nf-core-template-merge-3.3.2

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@nf-core-bot
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Version 3.3.2 of nf-core/tools has just been released with updates to the nf-core template. This automated pull-request attempts to apply the relevant updates to this pipeline.

Please make sure to merge this pull-request as soon as possible, resolving any merge conflicts in the nf-core-template-merge-3.3.2 branch (or your own fork, if you prefer). Once complete, make a new minor release of your pipeline.

For instructions on how to merge this PR, please see https://nf-co.re/docs/contributing/sync/.

For more information about this release of nf-core/tools, please see the v3.3.2 release page.

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Warning

Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 3.2.1.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation.

@khersameesh24 khersameesh24 self-assigned this Sep 9, 2025
@khersameesh24 khersameesh24 requested review from heylf and removed request for khersameesh24 September 9, 2025 21:24
Comment thread modules/nf-core/fastqc/environment.yml Outdated
Comment thread tests/.nftignore Outdated
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@heylf heylf left a comment

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Just the FastQC issue. Else looks fine.

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@heylf heylf left a comment

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LGTM

@khersameesh24 khersameesh24 merged commit 1355f46 into dev Sep 10, 2025
6 of 9 checks passed
@khersameesh24 khersameesh24 deleted the nf-core-template-merge-3.3.2 branch September 10, 2025 11:34
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3 participants