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Report a bug in the workflow

bugSomething isn't workingSomething isn't working

Status: Open.

#206 In qcif/taxodactyl;

· neoformit opened on Dec 17, 2025

Report non-candidate TOI matches if no candidates

enhancementNew feature or requestNew feature or request

report

Status: Open.

#205 In qcif/taxodactyl;

· neoformit opened on Dec 17, 2025

Configure Taxodactyl on Azure

enhancementNew feature or requestNew feature or request

Status: Open.

#190 In qcif/taxodactyl;

· mantczakaus opened on Nov 20, 2025

In context of homology tree, use a different word than candidates, e.g. subjects

enhancementNew feature or requestNew feature or request

refactoring

Status: Open.

#186 In qcif/taxodactyl;

· mantczakaus opened on Nov 17, 2025

WARN: Unknown directive <code>params</code> for process - in a log from Nextflow

bugSomething isn't workingSomething isn't working

Status: Open.

#184 In qcif/taxodactyl;

· mantczakaus opened on Nov 11, 2025

Optimise FastME parameters?

enhancementNew feature or requestNew feature or request

questionFurther information is requestedFurther information is requested

Status: Open.

#183 In qcif/taxodactyl;

· mantczakaus opened on Nov 11, 2025

Clarify requierements for input files format (fasta and csv)

DAFFRequested by DAFFRequested by DAFF

enhancementNew feature or requestNew feature or request

Status: Open.

#179 In qcif/taxodactyl;

· mantczakaus opened on Nov 4, 2025

Restrictions should be imposed on run/execution Name

enhancementNew feature or requestNew feature or request

Status: Open.

#178 In qcif/taxodactyl;

· mantczakaus opened on Nov 4, 2025

Barcode gap analysis

DAFFRequested by DAFFRequested by DAFF

enhancementNew feature or requestNew feature or request

Status: Open.

#173 In qcif/taxodactyl;

· mantczakaus opened on Oct 27, 2025

Get rid of configure environment process used by all python processes

enhancementNew feature or requestNew feature or request

refactoring

Status: Open.

#170 In qcif/taxodactyl;

· mantczakaus opened on Oct 16, 2025

Accept as input blast.xml instead of mock blast

enhancementNew feature or requestNew feature or request

refactoring

Status: Open.

#169 In qcif/taxodactyl;

· mantczakaus opened on Oct 16, 2025

Can we make pipeline work without sequences? i.e. just evaluate database coverage for some taxa of interest

DAFFRequested by DAFFRequested by DAFF

enhancementNew feature or requestNew feature or request

Status: Open.

#168 In qcif/taxodactyl;

· mantczakaus opened on Oct 15, 2025