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Converter of old-style relacs files to NIX

converts file-based relacs data files to nix files, does not convert repro-written special files such as stimspikes.dat, etc.

TODO

  • check if all required files can be found --> Done
  • unzip raw files if needed --> Done
  • check if there is already a nix file... Don't do anything unless there is a --force --> Done
  • convert raw traces to DataArrays (relacs.data.sampled), find out their names, etc. --> Done
  • read stimuli.dat for unit and sampling interval --> Done
  • read info file and convert to nix sections and properties. Beware ... old and new style metadata in relacs files... --> Done
  • convert event traces to DataArrays (relacs.data.event) --> Done
  • read stimuli.dat and get the repros and when they were run --> Done
  • figure out why the start index of baselineactivity was not read from file for dataset 2012-03-23... --> Done
  • write RePro Tags to file --> Done
  • Bind tags to traces --> Done
  • add metadata to repro tags --> Done
  • figure out when the stimuli were run and how long they lasted --> Done
  • figure out which properties must be stored as mutables. --> Done
  • write Stimulus MultiTags to file --> Done
  • bind them to the traces --> Done
  • add metadata --> Done
  • add features ---> Done
  • rename event and data trace types --> Done
  • unclear how to handle "init" lines in FileStimulus repro runs. There, the real duration and the duration information in the stimuli.dat may be contradictory...

Die 2 haben einen IndexError ausgespuckt: 2012-01-26-ai, 2012-01-27-aq --> confirmed

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