Code for the DiscoTope-3.0 paper and model
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May 5, 2026 - Python
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epitopes-prediction
Here are 11 public repositories matching this topic...
ISOform-guided prediction of epiTOPEs in cancer
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Apr 10, 2023 - Python
This repository describe the usage of neural networks to predict the affinity of peptides to MHC type I for humans. Neural networks was written in tensorflow and keras
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Nov 21, 2022 - Python
A Python package that has functions for featue calculation of protein sequences. Features that are calculated by this package are niched for Epitope prediction.
prediction feature-extraction amino-acid-sequence epitopes-prediction amino-acid-letters peptide-features calculate-features
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Sep 9, 2021 - Python
Comprehensive in-silico subunit vaccine discovery workflow
genomics sequencing next-generation-sequencing bioinformatics-pipeline genome-annotation vaccines immunoinformatics pathogens epitopes-prediction bacterial-genomes
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Mar 26, 2026 - Shell
Linear Epitope Predictions in SARS-CoV-19 Spike Protein
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Dec 11, 2020 - Jupyter Notebook
BMEB Thesis project which develops ssDNA aptamer sequences from probabilistic data per provided protein epitope.
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Apr 2, 2025 - Python
Study of 4 different GNNs for Conformational Epitope Prediction of B-Cells proteins
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Mar 26, 2026 - Python
Data Mining exercise of epitope prediction and classification of virus based on protein data
visualization data-science data data-mining machine-learning-algorithms pca classification dimensionality-reduction boruta classification-algorithm epitopes-prediction
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Jun 19, 2023 - Jupyter Notebook
An ML-based immunogenicity predictor for T-cell epitopes of Mycobacterium Tuberculosis. It is purely based on amino acid sequences of epitope. Used Physicochemical descriptors and Amino Acid composition to make this proteomic data ML ready.
random-forest bioinformatics-pipeline amino-acid-sequence immunoinformatics epitopes-prediction mycobacterium-tuberculosis epitope-immunogenicity-prediction immunogenicity-prediction t-cell-epitope
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Mar 7, 2026 - Python
Proteome-wide detection of immunogenic hotspots
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Dec 10, 2021 - Python
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