HNSCC survival analysis
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Updated
Jun 13, 2021 - R
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hnscc
Here are 6 public repositories matching this topic...
Given a gene expression dataset (from RNAseq) and a clinical dataset with survival information and tumor status, conduct differential expression analysis and pathway analysis between tumor and tumor-free patient groups. Also includes survival analysis for each siginficant gene and hierarchical clustering analysis for disease subtypes.
bioinformatics r cancer-genomics bioconductor rnaseq survival-analysis pathway-analysis differential-expression hnscc
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Aug 20, 2026 - R
Code and source data for the HNSCC stromal-immune niche balance study
bioinformatics survival-analysis single-cell-rna-seq spatial-transcriptomics hnscc tumor-microenvironment
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Aug 24, 2026 - Python
Re-analysis of the Cillo et al. 2020 (Immunity) human HNSCC immune scRNA-seq dataset
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Jul 14, 2026 - R
Reproducible code and derived results for a multi-cohort landmark meta-analysis of HNSCC hypoxia signatures.
bioinformatics reproducible-research survival-analysis meta-analysis hnscc hypoxia landmark-analysis
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Sep 6, 2026 - Python
Detect HPV as the primary cause of Head and Neck Carcinoma.
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Aug 18, 2025 - Jupyter Notebook
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